STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAMPCathelicidin antimicrobial peptide. (171 aa)    
Predicted Functional Partners:
G1LQS2_AILME
Death domain-containing protein.
   
 
 0.917
RELA
RELA proto-oncogene, NF-kB subunit.
   
 
 0.913
JUN
Jun proto-oncogene, AP-1 transcription factor subunit; Belongs to the bZIP family.
     
 0.816
HLA-DPA1
Major histocompatibility complex, class II, DP alpha 1; Belongs to the MHC class II family.
    
 
 0.749
NFKB2
Nuclear factor kappa B subunit 2.
   
 
 0.748
ELANE
Elastase, neutrophil expressed; Belongs to the peptidase S1 family.
   
 
 0.693
G1M229_AILME
Uncharacterized protein.
   
  
 0.659
RELB
RELB proto-oncogene, NF-kB subunit.
   
 
 0.591
REL
REL proto-oncogene, NF-kB subunit.
   
 
 0.591
S100A8
Protein S100; Belongs to the S-100 family.
   
 
 0.564
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.