STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHF6PHD finger protein 6. (365 aa)    
Predicted Functional Partners:
G1LA80_AILME
WD_REPEATS_REGION domain-containing protein.
   
 0.719
RBBP4
WD_REPEATS_REGION domain-containing protein.
   
 0.719
RBBP5
RB binding protein 5, histone lysine methyltransferase complex subunit.
   
 0.652
ASH2L
ASH2 like, histone lysine methyltransferase complex subunit.
    
 0.631
RBBP7
RB binding protein 7, chromatin remodeling factor.
   
 0.623
PHF1
PHD finger protein 1.
   
 0.591
SUZ12
SUZ12 polycomb repressive complex 2 subunit.
   
 0.568
CTPS2
CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.
    
 
 0.555
KDM6A
Lysine demethylase 6A.
   
 0.550
EED
Embryonic ectoderm development.
   
 0.547
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.