STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC160Coiled-coil domain containing 160. (350 aa)    
Predicted Functional Partners:
LSS
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
  
 0.756
SQLE
Squalene epoxidase.
   
 0.693
MSMO1
Methylsterol monooxygenase 1; Belongs to the sterol desaturase family.
   
 0.689
FAXDC2
Fatty acid hydroxylase domain containing 2; Belongs to the sterol desaturase family.
   
 0.689
CH25H
Cholesterol 25-hydroxylase; Belongs to the sterol desaturase family.
   
 0.689
FDFT1
Farnesyl-diphosphate farnesyltransferase 1.
  
 
 0.655
ERG28
Ergosterol biosynthesis 28 homolog.
   
 
 0.641
EFHC2
EF-hand domain containing 2.
      
 0.638
HSD17B7
Hydroxysteroid 17-beta dehydrogenase 7.
   
 
 0.636
SIGMAR1
Sigma non-opioid intracellular receptor 1.
   
 
 0.630
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.