STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MNX1Motor neuron and pancreas homeobox 1. (225 aa)    
Predicted Functional Partners:
TBX20
T-box transcription factor 20.
    
 
 0.581
VIPR1
Vasoactive intestinal peptide receptor 1; Belongs to the G-protein coupled receptor 2 family.
      
 0.578
PTF1A
Pancreas associated transcription factor 1a.
    
 
 0.570
TSPAN2
Tetraspanin.
      
 0.558
RFX4
Regulatory factor X4.
      
 0.538
FOXA2
Forkhead box A2.
    
 0.530
GDF15
Growth differentiation factor 15.
      
 0.523
CACNB1
Calcium voltage-gated channel auxiliary subunit beta 1.
   
  
 0.502
LMBR1
Limb development membrane protein 1; Belongs to the LIMR family.
      
 0.499
POU1F1
POU domain protein.
    
 
 0.495
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.