STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G1L3N0_AILMEUncharacterized protein. (515 aa)    
Predicted Functional Partners:
TMEM147
Transmembrane protein 147.
    
 
 0.902
CCDC47
Coiled-coil domain containing 47.
    
 
 0.901
TMCO1
Transmembrane and coiled-coil domains 1.
   
 
 0.867
SEC61A2
SEC61 translocon alpha 2 subunit; Belongs to the SecY/SEC61-alpha family.
   
 
 0.773
SEC61A1
SEC61 translocon alpha 1 subunit.
   
 
 0.773
RAB5IF
RAB5 interacting factor.
   
   0.767
RPL11
Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family.
    
 
 0.763
RPL13
Ribosomal protein L13.
    
   0.757
RPL24
TRASH domain-containing protein.
    
   0.757
SEC61B
SEC61 translocon beta subunit.
    
   0.757
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.