Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NRBP1Nuclear receptor binding protein 1. (543 aa)    
Predicted Functional Partners:
TSC22D2
TSC22 domain family member 2.
    
 
 0.963
TSC22D3
TSC22 domain family member 3.
    
 
 0.940
TSC22D1
TSC22 domain family member 1.
    
 
 0.940
ELOC
Skp1_POZ domain-containing protein; Belongs to the SKP1 family.
    
 
 0.841
ELOB
Elongin B.
    
 
 0.825
NRBP2
Nuclear receptor binding protein 2.
    
   0.808
PROCA1
Protein interacting with cyclin A1.
      
 0.716
TSC22D4
TSC22 domain family member 4.
    
 
 0.704
SNRPD1
Small nuclear ribonucleoprotein Sm D1; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. May act as a charged protein scaffold to promote snRNP assembly or strengthen snRNP-snRNP interactions through non-specific electrostatic contacts with RNA.
      
 0.602
STRA8
Stimulated by retinoic acid 8.
      
 0.602
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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