STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VASH2Vasohibin 2. (355 aa)    
Predicted Functional Partners:
SVBP
Small vasohibin binding protein.
    
 0.957
HSF2
Heat shock transcription factor 2.
      
 0.703
TTL
Tubulin tyrosine ligase.
      
 0.531
GCM1
Glial cells missing transcription factor 1.
      
 0.524
CDKN1B
Cyclin dependent kinase inhibitor 1B.
      
 0.521
MAP4
Microtubule-associated protein.
      
 0.520
MARK4
Non-specific serine/threonine protein kinase.
      
 0.517
NDNF
Neuron derived neurotrophic factor.
      
 0.505
LAMA4
Laminin subunit alpha 4.
    
 
 0.471
WFS1
Wolframin ER transmembrane glycoprotein.
      
 0.465
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.