STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
STK40Serine/threonine kinase 40. (445 aa)    
Predicted Functional Partners:
KPNA6
Importin subunit alpha; Functions in nuclear protein import.
   
  
 0.745
LAMB1
Laminin subunit beta 1.
      
 0.726
VAC14
VAC14 component of PIKFYVE complex.
   
 
 0.716
CTC1
CST telomere replication complex component 1.
      
 0.710
DNAJB4
DnaJ heat shock protein family (Hsp40) member B4.
   
 
 0.702
YARS1
Tyrosine--tRNA ligase.
      
 0.695
USP33
Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family.
    
 
 0.683
COP1
COP1 E3 ubiquitin ligase.
    
 
 0.672
TRIB1
Tribbles pseudokinase 1.
    
 
0.600
NLE1
Notchless homolog 1.
   
  
 0.574
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.