Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
IFT57Intraflagellar transport 57. (460 aa)    
Predicted Functional Partners:
IFT172
Intraflagellar transport 172.
   
 0.999
IFT22
Intraflagellar transport 22.
   
 0.998
IFT88
Intraflagellar transport 88.
   
 0.998
CLUAP1
Clusterin associated protein 1.
   
 0.998
IFT46
Intraflagellar transport 46.
   
 0.998
TRAF3IP1
TRAF3 interacting protein 1.
    
 0.998
IFT20
Intraflagellar transport 20.
    
 0.997
LOC100480284
Uncharacterized protein.
   
 0.997
IFT81
Intraflagellar transport 81.
    
 0.996
TTC26
Tetratricopeptide repeat domain 26.
   
 0.995
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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