STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPATC1LSpermatogenesis and centriole associated 1 like. (343 aa)    
Predicted Functional Partners:
CFAP52
Cilia and flagella associated protein 52.
   
  
 0.687
CNTLN
Uncharacterized protein.
      
 0.663
TENT5C
Terminal nucleotidyltransferase 5C.
   
  
 0.580
CEP112
Centrosomal protein 112.
   
  
 0.551
TSGA10
Testis specific 10.
      
 0.551
RTL6
Retrotransposon Gag like 6.
      
 0.536
HOOK1
Hook microtubule tethering protein 1.
      
 0.515
TRAPPC2L
Trafficking protein particle complex 2 like.
      
 0.508
G1L4L8_AILME
Uncharacterized protein.
    
 
 0.505
ZNF182
Zinc finger protein 182.
     
 0.493
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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