STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPATC1LSpermatogenesis and centriole associated 1 like. (343 aa)    
Predicted Functional Partners:
ACTRT1
Actin related protein T1; Belongs to the actin family.
   
  
 0.643
CEP112
Centrosomal protein 112.
   
  
 0.616
TRAPPC2L
Trafficking protein particle complex 2 like.
      
 0.573
CETN1
Centrin 1.
      
 0.517
CEP135
Centrosomal protein 135.
      
 0.515
CCDC183
Coiled-coil domain containing 183.
      
 0.512
SPAG6
Sperm associated antigen 6.
      
 0.481
QSOX2
Sulfhydryl oxidase.
   
  
 0.448
DRC1
Dynein regulatory complex subunit 1.
      
 0.437
CFAP45
Cilia and flagella associated protein 45.
      
 0.435
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.