STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LMBR1Limb development membrane protein 1; Belongs to the LIMR family. (470 aa)    
Predicted Functional Partners:
MCTP1
Multiple C2 and transmembrane domain containing 1.
      
 0.752
FAM210B
Family with sequence similarity 210 member B.
      
 0.747
CHST4
Sulfotransferase; Belongs to the sulfotransferase 1 family.
      
 0.693
G1MKY5_AILME
Uncharacterized protein.
    
 
 0.631
FAM172A
Family with sequence similarity 172 member A.
      
 0.623
QSOX2
Sulfhydryl oxidase.
    
 
 0.622
MB21D2
Mab-21 domain containing 2.
      
 0.608
EN2
Homeobox protein engrailed-like.
      
 0.605
NOM1
Nucleolar protein with MIF4G domain 1.
      
 0.592
MKLN1
Muskelin 1.
      
 0.578
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.