Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G1L3R6_AILMEUncharacterized protein. (478 aa)    
Predicted Functional Partners:
CTNNB1
Catenin beta 1.
   
 0.972
JUP
Junction plakoglobin.
   
 0.945
CTNND1
Catenin delta 1.
   
 0.943
MDM2
E3 ubiquitin-protein ligase Mdm2; Belongs to the MDM2/MDM4 family.
    
 0.879
VCL
Vinculin.
   
 0.789
RAPGEF1
Rap guanine nucleotide exchange factor 1.
     
 0.782
CBLL1
Cbl proto-oncogene like 1.
    
 0.778
ARVCF
ARVCF delta catenin family member.
   
 0.760
MMP9
Matrix metallopeptidase 9.
    
 0.752
SNAI2
Snail family transcriptional repressor 2.
    
 0.744
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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