STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G1L3R6_AILMEUncharacterized protein. (478 aa)    
Predicted Functional Partners:
CTNNB1
Catenin beta 1.
   
 0.990
CTNND1
Catenin delta 1.
    
 0.980
JUP
Junction plakoglobin.
   
 0.977
PANDA_007547
Uncharacterized protein.
    
 0.959
CTNNA1
Catenin alpha 1.
    
 0.959
CTNNA3
Uncharacterized protein.
    
 0.949
PANDA_019313
Uncharacterized protein.
    
 0.919
CDH1
Cadherin 1; Cadherins are calcium-dependent cell adhesion proteins.
  
  
 
0.901
MMP9
Matrix metallopeptidase 9.
    
 0.886
CASP3
Caspase 3; Belongs to the peptidase C14A family.
   
 0.839
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.