STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCP1Organic solute carrier partner 1. (375 aa)    
Predicted Functional Partners:
WDR54
WD repeat domain 54.
   
   0.819
STS
Steroid sulfatase.
      
 0.675
GYG2
Glycogenin 2.
    
   0.657
ARL14EP
ADP ribosylation factor like GTPase 14 effector protein.
      
 0.647
LSM10
LSM10, U7 small nuclear RNA associated.
   
  
 0.612
STK40
Serine/threonine kinase 40.
      
 0.592
PSMD3
Proteasome 26S subunit, non-ATPase 3.
      
 0.557
USP16
Ubiquitin carboxyl-terminal hydrolase 16; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes.
    
   0.513
CAGE1
Cancer antigen 1.
      
 0.489
KIAA0100
KIAA0100.
      
 0.459
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.