STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G1L3S3_AILMEUncharacterized protein. (482 aa)    
Predicted Functional Partners:
SMPD1
Sphingomyelin phosphodiesterase 1.
   
 
 0.939
SMPD2
Sphingomyelin phosphodiesterase 2.
     
 0.939
SMPD4
Sphingomyelin phosphodiesterase 4.
     
 0.930
ASAH1
N-acylsphingosine amidohydrolase 1; Belongs to the acid ceramidase family.
   
 
 0.922
DEGS2
Delta 4-desaturase, sphingolipid 2.
     
 0.921
ACER2
Alkaline ceramidase; Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid.
     
 0.920
SMPD3
Sphingomyelin phosphodiesterase 3.
     
 0.918
CERS1
TLC domain-containing protein.
   
 0.918
SGMS1
Sphingomyelin synthase 1.
     
 0.916
SAMD8
Sterile alpha motif domain containing 8.
     
 0.916
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.