STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VSIG4V-set and immunoglobulin domain containing 4. (398 aa)    
Predicted Functional Partners:
C1QA
Complement C1q A chain.
   
  
 0.958
C1QC
Complement C1q C chain.
   
  
 0.948
MS4A4A
Uncharacterized protein.
   
  
 0.640
CD5L
CD5 molecule like.
   
  
 0.607
G1L6A5_AILME
Uncharacterized protein.
    
 
 0.526
C3
Complement C3.
    
 
 0.526
G1M0C4_AILME
Uncharacterized protein.
    
 
 0.526
CSF1R
Colony stimulating factor 1 receptor; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.
   
  
 0.515
IRF5
Interferon regulatory factor 5.
   
  
 0.505
RFLNB
Refilin B.
      
 0.499
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
Server load: medium (62%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.