STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF513Zinc finger protein 513. (524 aa)    
Predicted Functional Partners:
LYPD6
LY6/PLAUR domain containing 6.
      
 0.713
TTC7A
Tetratricopeptide repeat domain 7A.
    
 
 0.698
SNRNP200
Small nuclear ribonucleoprotein U5 subunit 200.
    
 0.609
PRPF31
Pre-mRNA processing factor 31.
    
 
 0.594
PRPF6
Pre-mRNA processing factor 6.
    
 
 0.573
PRPF4
Pre-mRNA processing factor 4.
    
 
 0.538
PRPF3
Pre-mRNA processing factor 3.
      
 0.534
SLC30A3
Solute carrier family 30 member 3.
     
 0.521
PRPF8
Pre-mRNA processing factor 8.
    
 
 0.510
TBC1D30
TBC1 domain family member 30.
      
 0.507
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.