Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PTCHD4SSD domain-containing protein. (846 aa)    
Predicted Functional Partners:
UTP18
UTP18 small subunit processome component.
      
 0.516
DDA1
DET1 and DDB1 associated 1.
      
 0.485
HIVEP1
Human immunodeficiency virus type I enhancer binding protein 1.
      
 0.463
DISP3
Dispatched RND transporter family member 3.
   
  
 0.423
VCPIP1
Valosin containing protein interacting protein 1.
      
 0.405
TMEM178A
Transmembrane protein 178A.
      
 0.400
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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