STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LEPROTL1Leptin receptor overlapping transcript like 1. (126 aa)    
Predicted Functional Partners:
TMEM50A
Transmembrane protein 50A.
   
 
 0.746
TMEM50B
Transmembrane protein 50B.
   
 
 0.746
TUT1
Speckle targeted PIP5K1A-regulated poly(A) polymerase; Poly(A) polymerase that creates the 3'-poly(A) tail of specific pre-mRNAs. Localizes to nuclear speckles together with PIP5K1A and mediates polyadenylation of a select set of mRNAs, such as HMOX1. In addition to polyadenylation, it is also required for the 3'-end cleavage of pre-mRNAs: binds to the 3'UTR of targeted pre-mRNAs and promotes the recruitment and assembly of the CPSF complex on the 3'UTR of pre-mRNAs. In addition to adenylyltransferase activity, also has uridylyltransferase activity. However, the ATP ratio is higher tha [...]
      
 0.677
NAA30
N(alpha)-acetyltransferase 30, NatC catalytic subunit.
      
 0.635
HTRA4
HtrA serine peptidase 4.
      
 0.588
TM4SF19
Uncharacterized protein.
      
 0.587
ZC3H8
Zinc finger CCCH-type containing 8.
      
 0.575
SH3D21
SH3 domain containing 21.
      
 0.568
NABP2
Nucleic acid binding protein 2.
      
 0.568
TCAIM
T cell activation inhibitor, mitochondrial.
      
 0.568
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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