Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C1QTNF7C1q and TNF related 7. (299 aa)    
Predicted Functional Partners:
EFHB
EF-hand domain family member B.
      
 0.743
FBXL5
F-box and leucine rich repeat protein 5.
      
 0.673
PLEKHG1
Pleckstrin homology and RhoGEF domain containing G1.
      
 0.576
ATP6V0A1
V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase.
    
 
 0.564
SFSWAP
Splicing factor SWAP.
      
 0.563
TMC1
Transmembrane channel-like protein.
    
 0.561
FIGN
Fidgetin, microtubule severing factor; Belongs to the AAA ATPase family.
    
 0.556
COL2A1
Collagen type II alpha 1 chain.
   
 0.555
ARHGAP6
Rho GTPase activating protein 6.
      
 0.550
PCDH15
Uncharacterized protein.
   
 
 0.545
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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