STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1QTNF7C1q and TNF related 7. (299 aa)    
Predicted Functional Partners:
IL6ST
Interleukin 6 signal transducer.
      
 0.607
PLOD3
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3.
   
 0.571
ADAMTSL1
ADAMTS like 1.
    
 0.497
SERPINB8
Serpin family B member 8; Belongs to the serpin family.
    
 0.488
CCL24
C-C motif chemokine ligand 24.
   
 0.486
SERPINA12
Serpin family A member 12; Belongs to the serpin family.
    
 0.484
SERPINB12
Serpin family B member 12; Belongs to the serpin family.
    
 0.484
COL2A1
Collagen type II alpha 1 chain.
  
0.467
CDK5RAP3
CDK5 regulatory subunit associated protein 3.
      
 0.456
TNFSF9
TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.
      
 0.448
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.