STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNX17Sorting nexin 17. (472 aa)    
Predicted Functional Partners:
KRIT1
Uncharacterized protein.
    
 
 0.832
VPS35
VPS35 retromer complex component.
    
 
 0.787
SNX2
Sorting nexin 2.
   
 
 0.742
SNX5
Sorting nexin; Involved in several stages of intracellular trafficking.
    
 
 0.726
LRP1
LDL receptor related protein 1.
    
 
 0.649
SNX6
Sorting nexin 6.
    
 
 0.639
SNX32
Sorting nexin; Involved in several stages of intracellular trafficking.
    
 
 0.639
SELE
Selectin E.
    
 
 0.631
SELP
Selectin P.
    
 
 0.631
STX18
Syntaxin 18.
      
 0.628
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.