STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTPRFProtein tyrosine phosphatase receptor type F. (1913 aa)    
Predicted Functional Partners:
INSR
Tyrosine-protein kinase receptor.
    
 0.989
CTNNB1
Catenin beta 1.
   
 0.924
G1M8X5_AILME
PH domain-containing protein.
    
 0.910
LRRC4B
Leucine rich repeat containing 4B.
    
 0.827
NTRK3
Ig-like domain-containing protein.
   
 0.793
PPFIBP1
PPFIA binding protein 1.
     
 0.737
LRFN4
Leucine rich repeat and fibronectin type III domain containing 4.
    
 0.726
IL1RAP
Interleukin 1 receptor accessory protein.
    
 0.717
ADAM15
ADAM metallopeptidase domain 15.
   
 
 0.706
LRFN3
Leucine-rich repeat and fibronectin type-III domain-containing protein 3; Cell adhesion molecule that mediates homophilic cell-cell adhesion in a Ca(2+)-independent manner. Promotes neurite outgrowth in hippocampal neurons (By similarity).
   
 0.681
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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