STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GABREGamma-aminobutyric acid type A receptor epsilon subunit; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (500 aa)    
Predicted Functional Partners:
HAP1
Huntingtin associated protein 1.
     
 0.933
GPHN
Molybdopterin molybdenumtransferase; Catalyzes two steps in the biosynthesis of the molybdenum cofactor. In the first step, molybdopterin is adenylated. Subsequently, molybdate is inserted into adenylated molybdopterin and AMP is released.
    
 0.917
TRAK2
Trafficking kinesin protein 2.
     
 0.908
PLCL1
Phosphoinositide phospholipase C.
     
 0.903
NSF
N-ethylmaleimide sensitive factor, vesicle fusing ATPase.
    
  0.900
TMEM200A
Transmembrane protein 200A.
      
 0.747
GABARAPL1
GABA type A receptor associated protein like 1.
    
  0.722
GABARAPL2
GABA type A receptor associated protein like 2.
    
  0.722
GABARAP
GABA type A receptor-associated protein.
    
  0.722
TMTC2
Transmembrane O-mannosyltransferase targeting cadherins 2.
      
 0.695
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.