STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LYZL4Lysozyme like 4; Belongs to the glycosyl hydrolase 22 family. (145 aa)    
Predicted Functional Partners:
YEATS4
YEATS domain containing 4.
      
 0.748
CSN2
Casein beta.
   
  
 0.625
LOC100464677
Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family.
   
  
 0.580
SPRYD4
SPRY domain containing 4.
     
 0.533
CST8
Cystatin 8.
   
  
 0.532
G1MJV6_AILME
Beta-defensin; Has antibacterial activity; Belongs to the beta-defensin family.
      
 0.510
PDZK1
PDZ domain containing 1.
   
 
 0.465
LALBA
Lactalbumin alpha; Belongs to the glycosyl hydrolase 22 family.
  
   
0.462
AKAP1
A-kinase anchoring protein 1.
      
 0.447
NKX2-6
NK2 homeobox 6.
      
 0.447
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.