STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TNFRSF21TNF receptor superfamily member 21. (653 aa)    
Predicted Functional Partners:
APP
Amyloid beta precursor protein.
    
 
 0.875
TRADD
TNFRSF1A associated via death domain.
    
 
 0.709
ST3GAL6
ST3 beta-galactoside alpha-2,3-sialyltransferase 6; Belongs to the glycosyltransferase 29 family.
      
 0.642
APLP2
Amyloid beta precursor like protein 2.
    
 
 0.629
CASP6
Caspase 6; Belongs to the peptidase C14A family.
      
 0.534
APLP1
Amyloid beta precursor like protein 1.
    
 
 0.495
TNFRSF25
TNF receptor superfamily member 25.
      
 0.489
SLC8A3
Solute carrier family 8 member A3; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.
      
 0.489
SLC15A4
Solute carrier family 15 member 4.
      
 0.473
SLC15A3
Solute carrier family 15 member 3.
      
 0.473
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.