STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRYBG1Crystallin beta-gamma domain containing 1; Belongs to the beta/gamma-crystallin family. (1671 aa)    
Predicted Functional Partners:
MCHR2
Melanin concentrating hormone receptor 2; Belongs to the G-protein coupled receptor 1 family.
    
 0.764
ROS1
Tyrosine-protein kinase receptor.
  
 
 0.574
PPP2R5C
Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit; The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment.
    
   0.528
PPP2R5D
Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit; The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment.
    
   0.528
ERGIC1
Endoplasmic reticulum-golgi intermediate compartment 1.
     
 0.520
PDXDC1
Pyridoxal dependent decarboxylase domain containing 1.
      
 0.519
CCNC
Cyclin C; Belongs to the cyclin family.
      
 0.457
RASGEF1B
RasGEF domain family member 1B.
    
 
 0.451
ARID1B
AT-rich interaction domain 1B.
      
 0.451
CLSTN2
Calsyntenin 2.
      
 0.437
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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