STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTP4A3Protein tyrosine phosphatase 4A3. (174 aa)    
Predicted Functional Partners:
RABGGTB
Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.
    
 0.633
PDE4A
Phosphodiesterase.
   
  
 0.509
RCAN1
Regulator of calcineurin 1.
   
  
 0.484
CNNM3
Cyclin and CBS domain divalent metal cation transport mediator 3.
    
 
 0.476
CNNM2
Cyclin and CBS domain divalent metal cation transport mediator 2.
    
 
 0.476
DUSP22
Dual specificity phosphatase 22.
    
 
 0.470
CNNM4
Cyclin and CBS domain divalent metal cation transport mediator 4.
    
 
 0.464
RHEB
Ras homolog, mTORC1 binding.
   
 
 0.456
MYOZ3
Myozenin 3.
      
 0.449
KCNG2
Potassium voltage-gated channel modifier subfamily G member 2; Belongs to the potassium channel family.
      
 0.439
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.