STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RTN4IP1Uncharacterized protein. (130 aa)    
Predicted Functional Partners:
NDUFC1
NADH:ubiquinone oxidoreductase subunit C1.
      
 0.728
TMEM126A
Transmembrane protein 126A.
   
  
 0.713
MRPL30
Ribosomal_L30 domain-containing protein.
      
 0.701
HCCS
Cytochrome c heme lyase; Links covalently the heme group to the apoprotein of cytochrome c.
   
  
 0.700
WFS1
Wolframin ER transmembrane glycoprotein.
      
 0.603
MRPL38
Mitochondrial ribosomal protein L38.
  
  
 0.590
QRSL1
Glutaminyl-tRNA amidotransferase subunit QRSL1.
   
  
 0.583
SPG7
SPG7 matrix AAA peptidase subunit, paraplegin.
      
 0.572
SEC63
SEC63 homolog, protein translocation regulator.
      
 0.560
BEND3
BEN domain containing 3.
      
 0.549
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.