STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105238342Uncharacterized protein. (527 aa)    
Predicted Functional Partners:
CATSPERD
Cation channel sperm associated auxiliary subunit delta.
  
 
 0.953
CATSPER1
Cation channel sperm associated 1.
    
 0.940
LOC105241883
Uncharacterized protein.
 
  
  0.939
CATSPER3
Cation channel sperm associated 3.
    
 0.924
CATSPER4
Cation channel sperm associated 4.
    
 0.921
CATSPER2
Cation channel sperm associated 2.
  
 
 0.917
CATSPERG
Cation channel sperm associated auxiliary subunit gamma.
    
 0.902
CATSPERE
Catsper channel auxiliary subunit epsilon.
  
 
 0.893
CATSPERZ
Uncharacterized protein.
    
 0.842
CACNA1G
Calcium voltage-gated channel subunit alpha1 G.
    
 0.777
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.