STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMGXB4HMG-box containing 4. (601 aa)    
Predicted Functional Partners:
FOXRED2
FAD dependent oxidoreductase domain containing 2.
      
 0.752
RASD2
RASD family member 2.
      
 0.695
PGAP6
Transmembrane protein 8A.
      
 0.631
RBFOX2
RNA binding fox-1 homolog 2.
      
 0.604
G1MCX1_AILME
SAM domain-containing protein.
    
 
 0.601
TOM1
Target of myb1 membrane trafficking protein; Belongs to the TOM1 family.
      
 0.600
TXN2
Thioredoxin 2.
      
 0.589
METTL23
Methyltransferase like 23.
      
 0.545
ZFC3H1
Zinc finger C3H1-type containing.
      
 0.527
MED29
Mediator complex subunit 29.
      
 0.516
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.