STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOWAHCSosondowah ankyrin repeat domain family member C. (426 aa)    
Predicted Functional Partners:
DCAF7
DDB1 and CUL4 associated factor 7.
    
 
 0.596
C9orf116
Chromosome 9 open reading frame 116.
    
 0.549
DIAPH3
Diaphanous related formin 3.
   
 0.520
PANDA_018642
FH2 domain-containing protein.
   
 0.520
DIAPH1
Diaphanous related formin 1.
   
 0.520
DIAPH2
Uncharacterized protein.
   
 0.520
KRT80
Keratin 80; Belongs to the intermediate filament family.
      
 0.518
TRAF7
TNF receptor associated factor 7.
    
 0.436
FXN
Frataxin.
    
   0.426
S100A14
S100 calcium binding protein A14.
    
 0.412
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.