Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ADGRF5Adhesion G protein-coupled receptor F5; Belongs to the G-protein coupled receptor 2 family. (1303 aa)    
Predicted Functional Partners:
PTPRB
Protein tyrosine phosphatase receptor type B.
   
 
 0.924
SFTPC
Surfactant protein C.
   
 
 0.771
SFTPB
Surfactant protein B.
   
 
 0.720
CDH5
Cadherin 5; Cadherins are calcium-dependent cell adhesion proteins.
   
  
 0.663
CYYR1
Cysteine and tyrosine rich 1.
   
    0.652
TIE1
Tyrosine kinase with immunoglobulin like and EGF like domains 1.
   
  
 0.619
SSPO
SCO-spondin.
   
   0.597
VWF
Von Willebrand factor.
   
   0.597
USHBP1
USH1 protein network component harmonin binding protein 1.
  
  
 0.591
SCTR
Secretin receptor; Belongs to the G-protein coupled receptor 2 family.
   
 
 0.578
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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