STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBXN8UBX domain protein 8. (278 aa)    
Predicted Functional Partners:
UBXN7
UBX domain-containing protein 7.
    
 
 0.953
UBXN2A
UBX domain protein 2A.
    
 
 0.812
UBXN1
UBX domain protein 1.
   
 
 0.811
UBXN11
UBX domain protein 11.
    
 
 0.809
VCP
Valosin containing protein; Belongs to the AAA ATPase family.
   
 0.790
UBAC2
UBA domain containing 2.
    
 
 0.769
UBXN6
UBX domain protein 6.
    
 
 0.761
GIN1
Gypsy retrotransposon integrase 1.
      
 0.749
UFD1
Ubiquitin recognition factor in ER associated degradation 1.
    
 
 0.731
UBXN10
UBX domain protein 10.
   
  
 0.719
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.