G1L483_AILME protein (Ailuropoda melanoleuca)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

G1L483_AILME

Uncharacterized protein. (48 aa)

Predicted Functional Partners:

PCGF5

0.966

PCGF6

0.899

RNF2

0.854

PCGF3

0.846

DCAF7

0.845

RYBP

0.829

YAF2

0.806

PCGF1

0.782

CSNK2A1

0.761

CSNK2B

0.690

Your Current Organism:

Ailuropoda melanoleuca

NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CSNK2A1	CSNK2B	ENSAMEP00000014833	ENSAMEP00000009755	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.	0.985
CSNK2A1	DCAF7	ENSAMEP00000014833	ENSAMEP00000003526	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	DDB1 and CUL4 associated factor 7.	0.710
CSNK2A1	G1L483_AILME	ENSAMEP00000014833	ENSAMEP00000001693	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.761
CSNK2A1	PCGF1	ENSAMEP00000014833	ENSAMEP00000018185	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Polycomb group ring finger 1.	0.493
CSNK2A1	PCGF3	ENSAMEP00000014833	ENSAMEP00000017692	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Polycomb group ring finger 3.	0.885
CSNK2A1	PCGF5	ENSAMEP00000014833	ENSAMEP00000017703	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Polycomb group ring finger 5.	0.921
CSNK2A1	PCGF6	ENSAMEP00000014833	ENSAMEP00000018926	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Polycomb group ring finger 6.	0.574
CSNK2A1	RNF2	ENSAMEP00000014833	ENSAMEP00000014251	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Ring finger protein 2.	0.885
CSNK2A1	RYBP	ENSAMEP00000014833	ENSAMEP00000015948	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	RING1 and YY1 binding protein.	0.683
CSNK2A1	YAF2	ENSAMEP00000014833	ENSAMEP00000014588	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	YY1 associated factor 2.	0.683
CSNK2B	CSNK2A1	ENSAMEP00000009755	ENSAMEP00000014833	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.985
CSNK2B	DCAF7	ENSAMEP00000009755	ENSAMEP00000003526	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.	DDB1 and CUL4 associated factor 7.	0.419
CSNK2B	G1L483_AILME	ENSAMEP00000009755	ENSAMEP00000001693	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.	Uncharacterized protein.	0.690
CSNK2B	PCGF1	ENSAMEP00000009755	ENSAMEP00000018185	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.	Polycomb group ring finger 1.	0.617
CSNK2B	PCGF3	ENSAMEP00000009755	ENSAMEP00000017692	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.	Polycomb group ring finger 3.	0.899
CSNK2B	PCGF5	ENSAMEP00000009755	ENSAMEP00000017703	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.	Polycomb group ring finger 5.	0.912
CSNK2B	PCGF6	ENSAMEP00000009755	ENSAMEP00000018926	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.	Polycomb group ring finger 6.	0.617
CSNK2B	RNF2	ENSAMEP00000009755	ENSAMEP00000014251	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.	Ring finger protein 2.	0.859
CSNK2B	RYBP	ENSAMEP00000009755	ENSAMEP00000015948	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.	RING1 and YY1 binding protein.	0.649
CSNK2B	YAF2	ENSAMEP00000009755	ENSAMEP00000014588	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.	YY1 associated factor 2.	0.649