FOXN3 protein (Ailuropoda melanoleuca) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

FOXN3

Forkhead box N3. (485 aa)

Predicted Functional Partners:

TTC16

0.750

SIN3A

0.661

YME1L1

0.605

PERM1

0.570

MDH1B

0.523

STON2

0.511

G1M5Y6_AILME

0.497

CHST11

0.493

SLC25A33

0.455

SLC25A36

0.455

Your Current Organism:

Ailuropoda melanoleuca

NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CHST11	FOXN3	ENSAMEP00000007099	ENSAMEP00000001700	Carbohydrate sulfotransferase.	Forkhead box N3.	0.493
FOXN3	CHST11	ENSAMEP00000001700	ENSAMEP00000007099	Forkhead box N3.	Carbohydrate sulfotransferase.	0.493
FOXN3	G1M5Y6_AILME	ENSAMEP00000001700	ENSAMEP00000014754	Forkhead box N3.	HMG box domain-containing protein.	0.497
FOXN3	MDH1B	ENSAMEP00000001700	ENSAMEP00000003089	Forkhead box N3.	Malate dehydrogenase 1B.	0.523
FOXN3	PERM1	ENSAMEP00000001700	ENSAMEP00000017498	Forkhead box N3.	Uncharacterized protein.	0.570
FOXN3	SIN3A	ENSAMEP00000001700	ENSAMEP00000008684	Forkhead box N3.	SIN3 transcription regulator family member A.	0.661
FOXN3	SLC25A33	ENSAMEP00000001700	ENSAMEP00000004233	Forkhead box N3.	Solute carrier family 25 member 33; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.455
FOXN3	SLC25A36	ENSAMEP00000001700	ENSAMEP00000017423	Forkhead box N3.	Solute carrier family 25 member 36; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.455
FOXN3	STON2	ENSAMEP00000001700	ENSAMEP00000002038	Forkhead box N3.	Stonin-2; Adapter protein involved in endocytic machinery. Involved in the synaptic vesicle recycling. May facilitate clathrin-coated vesicle uncoating; Belongs to the Stoned B family.	0.511
FOXN3	TTC16	ENSAMEP00000001700	ENSAMEP00000017739	Forkhead box N3.	Tetratricopeptide repeat domain 16.	0.750
FOXN3	YME1L1	ENSAMEP00000001700	ENSAMEP00000001945	Forkhead box N3.	YME1 like 1 ATPase.	0.605
G1M5Y6_AILME	FOXN3	ENSAMEP00000014754	ENSAMEP00000001700	HMG box domain-containing protein.	Forkhead box N3.	0.497
MDH1B	FOXN3	ENSAMEP00000003089	ENSAMEP00000001700	Malate dehydrogenase 1B.	Forkhead box N3.	0.523
MDH1B	PERM1	ENSAMEP00000003089	ENSAMEP00000017498	Malate dehydrogenase 1B.	Uncharacterized protein.	0.696
MDH1B	SLC25A33	ENSAMEP00000003089	ENSAMEP00000004233	Malate dehydrogenase 1B.	Solute carrier family 25 member 33; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.537
MDH1B	SLC25A36	ENSAMEP00000003089	ENSAMEP00000017423	Malate dehydrogenase 1B.	Solute carrier family 25 member 36; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.537
MDH1B	STON2	ENSAMEP00000003089	ENSAMEP00000002038	Malate dehydrogenase 1B.	Stonin-2; Adapter protein involved in endocytic machinery. Involved in the synaptic vesicle recycling. May facilitate clathrin-coated vesicle uncoating; Belongs to the Stoned B family.	0.618
MDH1B	TTC16	ENSAMEP00000003089	ENSAMEP00000017739	Malate dehydrogenase 1B.	Tetratricopeptide repeat domain 16.	0.773
MDH1B	YME1L1	ENSAMEP00000003089	ENSAMEP00000001945	Malate dehydrogenase 1B.	YME1 like 1 ATPase.	0.754
PERM1	FOXN3	ENSAMEP00000017498	ENSAMEP00000001700	Uncharacterized protein.	Forkhead box N3.	0.570