STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFCAB11EF-hand calcium binding domain 11. (161 aa)    
Predicted Functional Partners:
EFCAB2
EF-hand calcium binding domain 2.
      
 0.691
CFAP20
Cilia and flagella associated protein 20.
    
 
 0.675
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
    
 0.625
RBM43
RNA binding motif protein 43.
      
 0.603
CCDC141
Coiled-coil domain containing 141.
    
 0.600
FAM117B
Family with sequence similarity 117 member B.
      
 0.585
TENT5B
Terminal nucleotidyltransferase 5B.
      
 0.538
ADGRL2
Adhesion G protein-coupled receptor L2; Belongs to the G-protein coupled receptor 2 family.
    
 
 0.536
G1M4D4_AILME
Uncharacterized protein.
      
 0.528
LY6G5C
Lymphocyte antigen 6 family member G5C.
      
 0.513
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.