Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TBX20T-box transcription factor 20. (451 aa)    
Predicted Functional Partners:
SLC25A21
Solute carrier family 25 member 21; Belongs to the mitochondrial carrier (TC 2.A.29) family.
    
   0.932
PHF13
PHD finger protein 13.
    
   0.932
NKX2-5
NK2 homeobox 5.
   
 0.913
GATA4
GATA binding protein 4.
   
 0.887
TLE1
TLE family member 1, transcriptional corepressor.
    
 
 0.844
BLVRA
Biliverdin reductase A.
    
   0.808
GSC
Goosecoid homeobox.
    
 0.799
MEF2C
Myocyte enhancer factor 2C.
    
 0.736
ISL1
ISL LIM homeobox 1.
   
 0.725
ISL2
ISL LIM homeobox 2.
   
 0.725
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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