G1L4F5_AILME protein (Ailuropoda melanoleuca)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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Score

G1L4F5_AILME

Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family. (239 aa)

Predicted Functional Partners:

CHMP1A

0.919

CHMP7

0.906

CHMP5

0.906

C17orf75

0.879

CHMP6

0.879

PTPN23

0.843

CHMP2A

0.822

RNF103-2

0.799

SNF8

0.782

IST1

0.775

Your Current Organism:

Ailuropoda melanoleuca

NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C17orf75	CHMP1A	ENSAMEP00000005974	ENSAMEP00000001273	Chromosome 17 open reading frame 75.	Charged multivesicular body protein 1A.	0.800
C17orf75	CHMP2A	ENSAMEP00000005974	ENSAMEP00000007960	Chromosome 17 open reading frame 75.	Charged multivesicular body protein 2A.	0.881
C17orf75	CHMP5	ENSAMEP00000005974	ENSAMEP00000007913	Chromosome 17 open reading frame 75.	Charged multivesicular body protein 5.	0.780
C17orf75	CHMP7	ENSAMEP00000005974	ENSAMEP00000003138	Chromosome 17 open reading frame 75.	Charged multivesicular body protein 7.	0.719
C17orf75	G1L4F5_AILME	ENSAMEP00000005974	ENSAMEP00000001765	Chromosome 17 open reading frame 75.	Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.	0.879
C17orf75	IST1	ENSAMEP00000005974	ENSAMEP00000002661	Chromosome 17 open reading frame 75.	IST1 factor associated with ESCRT-III.	0.815
C17orf75	PTPN23	ENSAMEP00000005974	ENSAMEP00000013618	Chromosome 17 open reading frame 75.	Protein tyrosine phosphatase non-receptor type 23.	0.463
C17orf75	RNF103-2	ENSAMEP00000005974	ENSAMEP00000010469	Chromosome 17 open reading frame 75.	Uncharacterized protein.	0.882
C17orf75	SNF8	ENSAMEP00000005974	ENSAMEP00000005360	Chromosome 17 open reading frame 75.	Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family.	0.861
CHMP1A	C17orf75	ENSAMEP00000001273	ENSAMEP00000005974	Charged multivesicular body protein 1A.	Chromosome 17 open reading frame 75.	0.800
CHMP1A	CHMP2A	ENSAMEP00000001273	ENSAMEP00000007960	Charged multivesicular body protein 1A.	Charged multivesicular body protein 2A.	0.990
CHMP1A	CHMP5	ENSAMEP00000001273	ENSAMEP00000007913	Charged multivesicular body protein 1A.	Charged multivesicular body protein 5.	0.984
CHMP1A	CHMP6	ENSAMEP00000001273	ENSAMEP00000016214	Charged multivesicular body protein 1A.	Charged multivesicular body protein 6.	0.961
CHMP1A	CHMP7	ENSAMEP00000001273	ENSAMEP00000003138	Charged multivesicular body protein 1A.	Charged multivesicular body protein 7.	0.962
CHMP1A	G1L4F5_AILME	ENSAMEP00000001273	ENSAMEP00000001765	Charged multivesicular body protein 1A.	Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.	0.919
CHMP1A	IST1	ENSAMEP00000001273	ENSAMEP00000002661	Charged multivesicular body protein 1A.	IST1 factor associated with ESCRT-III.	0.923
CHMP1A	RNF103-2	ENSAMEP00000001273	ENSAMEP00000010469	Charged multivesicular body protein 1A.	Uncharacterized protein.	0.982
CHMP1A	SNF8	ENSAMEP00000001273	ENSAMEP00000005360	Charged multivesicular body protein 1A.	Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family.	0.632
CHMP2A	C17orf75	ENSAMEP00000007960	ENSAMEP00000005974	Charged multivesicular body protein 2A.	Chromosome 17 open reading frame 75.	0.881
CHMP2A	CHMP1A	ENSAMEP00000007960	ENSAMEP00000001273	Charged multivesicular body protein 2A.	Charged multivesicular body protein 1A.	0.990