Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RING1Ring finger protein 1. (406 aa)    
Predicted Functional Partners:
RNF2
Ring finger protein 2.
  
0.999
PCGF2
Polycomb group ring finger 2.
   
 0.997
CBX4
Chromobox 4.
    
 0.997
BMI1
RING-type domain-containing protein.
   
 0.994
CBX8
Chromobox 8.
    
 0.992
PCGF1
Polycomb group ring finger 1.
   
 0.992
CBX2
Chromobox 2.
    
 0.991
PCGF6
Polycomb group ring finger 6.
   
 0.990
PCGF5
Polycomb group ring finger 5.
   
 0.987
PHC3
Polyhomeotic homolog 3.
    
 0.977
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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