Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PROM1Prominin 1. (756 aa)    
Predicted Functional Partners:
FGFBP1
Fibroblast growth factor binding protein 1.
      
 0.716
CD34
CD34 molecule.
      
 0.692
TSG101
Tumor susceptibility 101.
    
 
 0.620
PECAM1
Platelet and endothelial cell adhesion molecule 1.
  
   
 0.616
CD44
CD44 molecule (Indian blood group).
      
 0.603
EPCAM
Epithelial cell adhesion molecule.
   
  
 0.585
LGR5
Leucine rich repeat containing G protein-coupled receptor 5.
      
 0.568
ABCA4
ATP binding cassette subfamily A member 4.
   
  
 0.560
NES
Nestin.
      
 0.559
ALDH3A1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
      
 0.558
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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