STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CIARTCircadian associated repressor of transcription. (385 aa)    
Predicted Functional Partners:
CRY2
Cryptochrome circadian regulator 2.
   
 
 0.682
G1LZL0_AILME
Uncharacterized protein.
    
 
 0.591
CRY1
Cryptochrome circadian regulator 1.
   
 
 0.583
NFIL3
Nuclear factor, interleukin 3 regulated.
   
  
 0.574
NR1D2
Nuclear receptor subfamily 1 group D member 2.
   
 
 0.555
DUSP10
Dual specificity phosphatase 10; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.
      
 0.555
NPAS4
Neuronal PAS domain protein 4.
      
 0.554
IRF1
Interferon regulatory factor 1.
      
 0.501
BHLHE40
Basic helix-loop-helix family member e40.
    
 
 0.495
MIGA2
Mitoguardin 2.
      
 0.490
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.