STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CIARTCircadian associated repressor of transcription. (385 aa)    
Predicted Functional Partners:
COQ10B
Coenzyme Q10B.
   
  
 0.613
MYLK4
Myosin light chain kinase family member 4; Belongs to the protein kinase superfamily.
      
 0.609
MIGA2
Mitoguardin 2.
      
 0.599
ROMO1
Reactive oxygen species modulator 1.
      
 0.598
CRY2
Cryptochrome circadian regulator 2.
   
 
 0.581
TEF
TEF transcription factor, PAR bZIP family member.
   
  
 0.556
OTOG
Otogelin.
      
 0.531
DOC2B
Double C2 domain beta.
      
 0.525
NR1D2
Nuclear receptor subfamily 1 group D member 2.
   
 
 0.519
CRY1
Cryptochrome circadian regulator 1.
   
 
 0.508
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.