STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COL25A1Collagen type XXV alpha 1 chain. (505 aa)    
Predicted Functional Partners:
PCSK4
Proprotein convertase subtilisin/kexin type 4; Belongs to the peptidase S8 family.
    
 0.656
G1LM57_AILME
P/Homo B domain-containing protein.
    
 0.656
FURIN
P/Homo B domain-containing protein; Belongs to the peptidase S8 family.
    
 0.656
EMID1
EMI domain containing 1.
  
  
0.651
COL21A1
Collagen type XXI alpha 1 chain.
  
  
0.567
LEMD1
LEM domain-containing protein.
      
 0.543
RPH3A
Rabphilin 3A.
      
 0.534
ZBTB7C
Zinc finger and BTB domain containing 7C.
    
 0.502
PLOD3
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3.
   
 0.480
PLOD1
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1.
   
 0.480
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.