STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IQCA1ATPase_AAA_core domain-containing protein. (443 aa)    
Predicted Functional Partners:
UBXN7
UBX domain-containing protein 7.
   
 0.925
LRRC10
Uncharacterized protein.
    
 
 0.713
RNF103-2
Uncharacterized protein.
   
 0.654
DAW1
Dynein assembly factor with WD repeats 1.
   
 
 0.653
UFD1
Ubiquitin recognition factor in ER associated degradation 1.
    
 0.638
IST1
IST1 factor associated with ESCRT-III.
    
 0.623
STK17B
Serine/threonine kinase 17b; Belongs to the protein kinase superfamily.
   
 
 0.623
CCDC149
Coiled-coil domain containing 149.
      
 0.615
YOD1
YOD1 deubiquitinase.
   
 0.594
UBXN1
UBX domain protein 1.
   
 0.577
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.