STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROGDIRogdi atypical leucine zipper. (292 aa)    
Predicted Functional Partners:
SMYD4
SET and MYND domain containing 4.
      
 0.780
DMXL2
Dmx like 2.
    
 
 0.763
DMXL1
Dmx like 1.
    
 
 0.763
LANCL1
LanC like 1.
      
 0.750
COPS7A
COP9 signalosome subunit 7A.
      
 0.737
PRPF31
Pre-mRNA processing factor 31.
      
 0.607
ACOX2
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
      
 0.603
G1L923_AILME
Uncharacterized protein; Belongs to the SKP1 family.
    
 
 0.593
SKP1
S-phase kinase associated protein 1; Belongs to the SKP1 family.
    
 
 0.593
ABHD11
Abhydrolase domain containing 11.
      
 0.579
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.