STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASB18Ankyrin repeat and SOCS box containing 18. (466 aa)    
Predicted Functional Partners:
SPSB1
SplA/ryanodine receptor domain and SOCS box containing 1.
     
 0.623
G1MIR2_AILME
Uncharacterized protein.
     
 0.564
UBA5
Ubiquitin like modifier activating enzyme 5.
   
 0.515
COPS8
COP9 signalosome subunit 8.
    
 0.499
CCDC13
Uncharacterized protein.
   
 
 0.465
COMMD8
COMM domain containing 8.
   
  0.449
HIGD1A
HIG1 hypoxia inducible domain family member 1A.
      
 0.449
NEDD8
NEDD8 ubiquitin like modifier.
    
  0.441
KCNA7
Potassium voltage-gated channel subfamily A member 7; Belongs to the potassium channel family.
   
 0.435
COMMD9
COMM domain containing 9.
   
  0.433
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.