Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZGPATUncharacterized protein. (531 aa)    
Predicted Functional Partners:
PRPF3
Pre-mRNA processing factor 3.
   
   0.856
DHX15
DEAH-box helicase 15.
   
 
 0.817
PRPF4
Pre-mRNA processing factor 4.
   
   0.811
G1L4P5_AILME
Uncharacterized protein.
   
  
 0.734
MARCHF6
Membrane associated ring-CH-type finger 6.
   
  
 0.661
DNAJC10
DnaJ homolog subfamily C member 10; Endoplasmic reticulum disulfide reductase involved both in the correct folding of proteins and degradation of misfolded proteins.
   
  
 0.620
KIAA1328
Uncharacterized protein.
    
   0.603
LSM5
U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.
    
   0.594
ARFRP1
ADP ribosylation factor related protein 1.
   
  
 0.590
GMEB2
Glucocorticoid modulatory element binding protein 2.
   
  
 0.588
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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