STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CFAP57Uncharacterized protein. (646 aa)    
Predicted Functional Partners:
LRRC23
Leucine rich repeat containing 23.
   
 0.815
CFAP43
Cilia and flagella associated protein 43.
   
 
 0.802
CFAP58
Cilia and flagella associated protein 58.
   
 0.648
TEKT2
Tektin 2.
   
   0.626
ZMYND12
Zinc finger MYND-type containing 12.
   
 
 0.624
SAXO1
Stabilizer of axonemal microtubules 1.
   
 0.579
CCDC39
Coiled-coil domain containing 39.
   
 0.563
DNALI1
Uncharacterized protein.
   
 
 0.554
G1LI58_AILME
Uncharacterized protein.
   
 
 0.554
CFAP20
Cilia and flagella associated protein 20.
    
 
 0.540
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.