STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APH1AAph-1 homolog A, gamma-secretase subunit. (265 aa)    
Predicted Functional Partners:
NCSTN
Nicastrin.
   
 0.996
PSENEN
Presenilin enhancer, gamma-secretase subunit.
   
 0.995
PSEN1
Presenilin 1.
   
 0.990
PSEN2
Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family.
   
 0.947
NOTCH2
Notch receptor 2.
    
 0.922
NOTCH3
Notch receptor 3.
    
 0.921
NOTCH4
Notch receptor 4.
    
 0.921
APH1B
Aph-1 homolog B, gamma-secretase subunit.
  
  
 
0.902
APP
Amyloid beta precursor protein.
    
 0.639
FAM185A
Family with sequence similarity 185 member A.
      
 0.613
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.