Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GBX2Gastrulation brain homeobox 2. (286 aa)    
Predicted Functional Partners:
OTX2
Orthodenticle homeobox 2.
    
 0.740
DIP2C
Disco interacting protein 2 homolog C.
      
 0.623
FGF8
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
   
 
 0.614
OLIG3
Oligodendrocyte transcription factor 3.
   
 0.584
TFAP2A
Transcription factor AP-2 alpha.
   
 0.581
ANAPC1
Anaphase promoting complex subunit 1.
      
 0.568
WNT1
Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.
    
 
 0.567
OTX1
Orthodenticle homeobox 1.
    
 0.553
THBS4
Thrombospondin 4.
    
 
 0.526
SOX2
SRY-box transcription factor 2.
    
 0.507
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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