STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATRAIDAll-trans retinoic acid induced differentiation factor. (212 aa)    
Predicted Functional Partners:
SLC37A3
Solute carrier family 37 member 3.
    
 
 0.898
LMBRD1
LMBR1 domain containing 1.
      
 0.718
SNX17
Sorting nexin 17.
   
  
 0.641
OSTM1
Osteoclastogenesis associated transmembrane protein 1.
      
 0.598
MAGEH1
MAGE family member H1.
      
 0.598
TECR
Trans-2,3-enoyl-CoA reductase.
   
  
 0.560
ABCD4
ATP binding cassette subfamily D member 4.
      
 0.559
CLCN7
Chloride channel protein.
      
 0.555
SLC37A2
Solute carrier family 37 member 2.
    
 
 0.523
SLC37A1
Solute carrier family 37 member 1.
    
 
 0.523
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.