STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF6Ring finger protein 6. (683 aa)    
Predicted Functional Partners:
RPS27A
Ubiquitin-like domain-containing protein.
    
 0.666
UBB
Ubiquitin B.
    
 0.645
LYPLAL1
Lysophospholipase like 1.
   
  
 0.642
RNF41
Ring finger protein 41.
    
 0.636
LARP6
La ribonucleoprotein domain family member 6.
      
 0.631
WASF3
WASP family member 3.
      
 0.623
AMFR
Autocrine motility factor receptor.
    
 
 0.615
SLC35D3
Solute carrier family 35 member D3.
      
 0.613
PDZK1IP1
PDZK1 interacting protein 1.
      
 0.601
RAP1GAP2
RAP1 GTPase activating protein 2.
      
 0.582
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.